{"id":342,"date":"2015-10-27T22:06:21","date_gmt":"2015-10-27T22:06:21","guid":{"rendered":"https:\/\/protsci-us2b.univ-nantes.fr\/mobpdb\/?page_id=342"},"modified":"2018-05-15T09:33:11","modified_gmt":"2018-05-15T09:33:11","slug":"download","status":"publish","type":"page","link":"https:\/\/protsci-us2b.univ-nantes.fr\/mobpdb\/?page_id=342","title":{"rendered":"Download"},"content":{"rendered":"<p><strong>Download genomic data<\/strong><br \/>\nThe following genomic data can be downloaded :<\/p>\n<ul>\n<li><a href=\"https:\/\/protsci-us2b.univ-nantes.fr\/mobpdb\/wp-content\/uploads\/2015\/10\/Classic.csv\">CSV formatted table of Classic OBPs<\/a><\/li>\n<li><a href=\"https:\/\/protsci-us2b.univ-nantes.fr\/mobpdb\/wp-content\/uploads\/2015\/10\/PlusC.csv\">CSV formatted table of PlusC OBPs<\/a><\/li>\n<li><a href=\"https:\/\/protsci-us2b.univ-nantes.fr\/mobpdb\/wp-content\/uploads\/2015\/10\/Two-domains.csv\">CSV formatted table of Two-domains OBPs<\/a><\/li>\n<li><a href=\"https:\/\/protsci-us2b.univ-nantes.fr\/mobpdb\/wp-content\/uploads\/2015\/10\/ND.csv\">CSV formatted table of family not determined OBPs<\/a><\/li>\n<\/ul>\n<p>These contain gene name, protein name, length, chromosomal location, OBP family (class), subfamily (Cluster), orthologous relationship.<\/p>\n<p><strong>Protein sequences by organism<\/strong><\/p>\n<ul>\n<li><em><a href=\"https:\/\/protsci-us2b.univ-nantes.fr\/mobpdb\/wp-content\/uploads\/2015\/10\/Anopheles_gambiae.txt\">Anopheles gambiae<\/a><\/em><\/li>\n<li><em><a href=\"https:\/\/protsci-us2b.univ-nantes.fr\/mobpdb\/wp-content\/uploads\/2015\/10\/Anopheles_albimanus.txt\">Anopheles albimanus<\/a><\/em><\/li>\n<li><em><a href=\"https:\/\/protsci-us2b.univ-nantes.fr\/mobpdb\/wp-content\/uploads\/2015\/10\/Anopheles_arabiensis.txt\">Anopheles arabiensis<\/a><\/em><\/li>\n<li><em><a href=\"https:\/\/protsci-us2b.univ-nantes.fr\/mobpdb\/wp-content\/uploads\/2015\/10\/Anopheles_atroparvus.txt\">Anopheles atroparvus<\/a><\/em><\/li>\n<li><em><a href=\"https:\/\/protsci-us2b.univ-nantes.fr\/mobpdb\/wp-content\/uploads\/2015\/10\/Anopheles_christyi.txt\">Anopheles christyi<\/a><\/em><\/li>\n<li><em><a href=\"https:\/\/protsci-us2b.univ-nantes.fr\/mobpdb\/wp-content\/uploads\/2015\/10\/Anopheles_coluzzii.txt\">Anopheles coluzzii<\/a><\/em><\/li>\n<li><em><a href=\"https:\/\/protsci-us2b.univ-nantes.fr\/mobpdb\/wp-content\/uploads\/2015\/10\/Anopheles_culicifacies.txt\">Anopheles culicifacies<\/a><\/em><\/li>\n<li><em><a href=\"https:\/\/protsci-us2b.univ-nantes.fr\/mobpdb\/wp-content\/uploads\/2015\/10\/Anopheles_darlingi.txt\">Anopheles darlingi<\/a><\/em><\/li>\n<li><em><a href=\"https:\/\/protsci-us2b.univ-nantes.fr\/mobpdb\/wp-content\/uploads\/2015\/10\/Anopheles_dirus.txt\">Anopheles dirus<\/a><\/em><\/li>\n<li><em><a href=\"https:\/\/protsci-us2b.univ-nantes.fr\/mobpdb\/wp-content\/uploads\/2015\/10\/Anopheles_epiroticus.txt\">Anopheles epiroticus<\/a><\/em><\/li>\n<li><em><a href=\"https:\/\/protsci-us2b.univ-nantes.fr\/mobpdb\/wp-content\/uploads\/2015\/10\/Anopheles_funestus.txt\">Anopheles funestus<\/a><\/em><\/li>\n<li><em><a href=\"https:\/\/protsci-us2b.univ-nantes.fr\/mobpdb\/wp-content\/uploads\/2015\/10\/Anopheles_maculatus.txt\">Anopheles maculatus<\/a><\/em><\/li>\n<li><em><a href=\"https:\/\/protsci-us2b.univ-nantes.fr\/mobpdb\/wp-content\/uploads\/2015\/10\/Anopheles_melas.txt\">Anopheles melas<\/a><\/em><\/li>\n<li><em><a href=\"https:\/\/protsci-us2b.univ-nantes.fr\/mobpdb\/wp-content\/uploads\/2015\/10\/Anopheles_merus.txt\">Anopheles merus<\/a><\/em><\/li>\n<li><em><a href=\"https:\/\/protsci-us2b.univ-nantes.fr\/mobpdb\/wp-content\/uploads\/2015\/10\/Anopheles_minimus.txt\">Anopheles minimus<\/a><\/em><\/li>\n<li><em><a href=\"https:\/\/protsci-us2b.univ-nantes.fr\/mobpdb\/wp-content\/uploads\/2015\/10\/Anopheles_quadriannulatus.txt\">Anopheles quadriannulatus<\/a><\/em><\/li>\n<li><em><a href=\"https:\/\/protsci-us2b.univ-nantes.fr\/mobpdb\/wp-content\/uploads\/2015\/10\/Anopheles_sinensis.txt\">Anopheles sinensis<\/a><\/em><\/li>\n<li><em><a href=\"https:\/\/protsci-us2b.univ-nantes.fr\/mobpdb\/wp-content\/uploads\/2015\/10\/Anopheles_stephensi.txt\">Anopheles stephensi<\/a><\/em><\/li>\n<li><em><a href=\"https:\/\/protsci-us2b.univ-nantes.fr\/mobpdb\/wp-content\/uploads\/2015\/10\/Aedes_aegypti.txt\">Aedes aegypti<\/a><\/em><\/li>\n<li><em><a href=\"https:\/\/protsci-us2b.univ-nantes.fr\/mobpdb\/wp-content\/uploads\/2015\/10\/Aedes_albopictus.txt\">Aedes albopictus<\/a><\/em><\/li>\n<li><em><a href=\"https:\/\/protsci-us2b.univ-nantes.fr\/mobpdb\/wp-content\/uploads\/2015\/10\/Culex_quinquefasciatus.txt\">Culex quinquefasciatus<\/a><\/em><\/li>\n<\/ul>\n<p><strong>Structural models of <em>Classic<\/em> OBPs by organism<\/strong><\/p>\n<ul>\n<li><a href=\".\/download\/Models\/anopheles_classic_obp_models.tar.gz\">3D models for <em>Classic<\/em> OBPs from <em>Anopheles gambiae<\/em><\/a><\/li>\n<li><a href=\".\/download\/Models\/aedes_classic_obp_models.tar.gz\">3D models for <em>Classic<\/em> OBPs from <em>Aedes aegypti<\/em><\/a><\/li>\n<li><a href=\".\/download\/Models\/culex_classic_obp_models.tar.gz\">3D models for <em>Classic<\/em> OBPs from <em>Culex quinquefasciatus<\/em><\/a><\/li>\n<\/ul>\n<p>Nb : molecular models after docking with any of the 126 odorants that were screened are not available for bulk download (too big files). These can be accessed for at the level of each protein (<a href=\"https:\/\/protsci-us2b.univ-nantes.fr\/cgi-bin\/mobpdb\/fiche_id.cgi?cquiobp10\" target=\"_blank\">see here for example for cquiobp10<\/a>).<\/p>\n","protected":false},"excerpt":{"rendered":"<p>Download genomic data The following genomic data can be downloaded : CSV formatted table of Classic OBPs CSV formatted table of PlusC OBPs CSV formatted table of Two-domains OBPs CSV formatted table of family not determined OBPs These contain gene name, protein name, length, chromosomal location, OBP family (class), subfamily (Cluster), orthologous relationship. Protein sequences [&hellip;]<\/p>\n","protected":false},"author":3,"featured_media":0,"parent":0,"menu_order":6,"comment_status":"closed","ping_status":"closed","template":"page-without-sidebar.php","meta":{"footnotes":""},"class_list":["post-342","page","type-page","status-publish","hentry"],"jetpack_sharing_enabled":true,"_links":{"self":[{"href":"https:\/\/protsci-us2b.univ-nantes.fr\/mobpdb\/index.php?rest_route=\/wp\/v2\/pages\/342","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/protsci-us2b.univ-nantes.fr\/mobpdb\/index.php?rest_route=\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/protsci-us2b.univ-nantes.fr\/mobpdb\/index.php?rest_route=\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/protsci-us2b.univ-nantes.fr\/mobpdb\/index.php?rest_route=\/wp\/v2\/users\/3"}],"replies":[{"embeddable":true,"href":"https:\/\/protsci-us2b.univ-nantes.fr\/mobpdb\/index.php?rest_route=%2Fwp%2Fv2%2Fcomments&post=342"}],"version-history":[{"count":21,"href":"https:\/\/protsci-us2b.univ-nantes.fr\/mobpdb\/index.php?rest_route=\/wp\/v2\/pages\/342\/revisions"}],"predecessor-version":[{"id":793,"href":"https:\/\/protsci-us2b.univ-nantes.fr\/mobpdb\/index.php?rest_route=\/wp\/v2\/pages\/342\/revisions\/793"}],"wp:attachment":[{"href":"https:\/\/protsci-us2b.univ-nantes.fr\/mobpdb\/index.php?rest_route=%2Fwp%2Fv2%2Fmedia&parent=342"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}