{"id":614,"date":"2018-05-03T11:38:27","date_gmt":"2018-05-03T11:38:27","guid":{"rendered":"https:\/\/protsci-us2b.univ-nantes.fr\/mobpdb\/?page_id=614"},"modified":"2018-05-15T09:10:23","modified_gmt":"2018-05-15T09:10:23","slug":"anopheles-epiroticus","status":"publish","type":"page","link":"https:\/\/protsci-us2b.univ-nantes.fr\/mobpdb\/?page_id=614","title":{"rendered":"Anopheles epiroticus"},"content":{"rendered":"<p>The <em>Anopheles sundaicus<\/em> complex includes <em>Anopheles epiroticus<\/em> (formerly A. sundaicus A), which is a malaria vector located in Cambodia, peninsular Malaysia, Sarawak, Thailand and Vietnam. Its genome was sequenced in 2012.<\/p>\n<p>(source &#038; for more information : <a href=\"https:\/\/www.vectorbase.org\/organisms\/anopheles-christyi\" rel=\"noopener\" target=\"_blank\">vectorbase.org<\/a>)<\/p>\n<p><strong>Statistics of OBPs from <em>Anopheles epiroticus<\/em>:<\/strong><\/p>\n<table style=\"height: 34px;\" border=\"\u00bb1\u2033\" width=\"600\" cellspacing=\"\u00bb0\u2033\" cellpadding=\"\u00bb0\u2033\">\n<tbody>\n<tr style=\"text-align: center;\">\n<td><\/td>\n<td>\n<form action=\"\/cgi-bin\/mobpdb\/resultat_sql.cgi\" method=\"post\">\n<button name=\"sql_query\" type=\"submit\" value=\"select * from proteins_v3 where Class like 'Classic%' and ID like 'AEPI%'\">Classic<\/button><br \/>\n<\/form>\n<\/td>\n<td>\n<form action=\"\/cgi-bin\/mobpdb\/resultat_sql.cgi\" method=\"post\">\n<button name=\"sql_query\" type=\"submit\" value=\"select * from proteins_v3 where Class like 'PlusC%' and ID like 'AEPI%'\">PlusC<\/button><br \/>\n<\/form>\n<\/td>\n<td>\n<form action=\"\/cgi-bin\/mobpdb\/resultat_sql.cgi\" method=\"post\">\n<button name=\"sql_query\" type=\"submit\" value=\"select * from proteins_v3 where Class like 'Two%' and ID like 'AEPI%'\">Two-domains*<\/button><br \/>\n<\/form>\n<\/td>\n<td>\n<form action=\"\/cgi-bin\/mobpdb\/resultat_sql.cgi\" method=\"post\">\n<button name=\"sql_query\" type=\"submit\" value=\"select * from proteins_v3 where Class like 'NA%' and ID like 'AEPI%'\">ND<\/button><br \/>\n<\/form>\n<\/td>\n<td>Total<\/td>\n<\/tr>\n<tr style=\"text-align: center;\">\n<td>Number of OBPs<\/td>\n<td style=\"text-align: center;\">24<\/td>\n<td style=\"text-align: center;\">14<\/td>\n<td style=\"text-align: center;\">9<\/td>\n<td style=\"text-align: center;\">0<\/td>\n<td style=\"text-align: center;\">47<\/td>\n<\/tr>\n<tr>\n<td><a href=\"https:\/\/protsci-us2b.univ-nantes.fr\/mobpdb\/?page_id=409\" target=\"_blank\">N\u00b0 with atomic structures (in PDB)<\/a><\/td>\n<td style=\"text-align: center;\">NA<\/td>\n<td style=\"text-align: center;\">NA<\/td>\n<td style=\"text-align: center;\">&#8211;<\/td>\n<td style=\"text-align: center;\">&#8211;<\/td>\n<td style=\"text-align: center;\">NA<\/td>\n<\/tr>\n<tr>\n<td>3D models<\/td>\n<td style=\"text-align: center;\">NA<\/td>\n<td style=\"text-align: center;\">NA<\/td>\n<td style=\"text-align: center;\">NA<\/td>\n<td style=\"text-align: center;\">&#8211;<\/td>\n<td style=\"text-align: center;\">NA<\/td>\n<\/tr>\n<tr>\n<td>Docking results**<\/td>\n<td style=\"text-align: center;\">NA<\/td>\n<td style=\"text-align: center;\">NA<\/td>\n<td style=\"text-align: center;\">NA<\/td>\n<td style=\"text-align: center;\">&#8211;<\/td>\n<td style=\"text-align: center;\">NA<\/td>\n<\/tr>\n<\/tbody>\n<\/table>\n<p><font size = \"1\">*(also known as <em>duplex<\/em> or <em>atypical<\/em>)<br \/>\n**(molecular docking was performed on 126 odorants that are known repellants and attractants for mosquitoes)<br \/>\nND : undetermined<br \/>\nNA : Not Available<\/font><\/p>\n<table width=\"100%\">\n<tr>\n<td>\n<p>\n<strong>Search the <span style=\"color: #3366ff;\">genomic<\/span> database for all OBP genes from <em>Anopheles epiroticus<\/em><\/strong><\/p>\n<form action=\"\/cgi-bin\/mobpdb\/motclef.cgi\" method=\"post\">\n<button name=\"smalldialogue\" type=\"submit\" value=\"AEPI\">Browse genomic data<\/button><br \/>\n<\/form>\n<\/p>\n<\/td>\n<\/tr>\n<tr>\n<td>\n<strong>Modelled structures of <em>Classic<\/em> OBP from <em>Anopheles epiroticus<\/em><\/strong><\/p>\n<form action=\"\/cgi-bin\/mobpdb\/resultat_sql.cgi\" method=\"post\">\n<button name=\"sql_query\" type=\"submit\" value=\"select ID, Name, Uniprot, Class, Cluster from proteins_v3 where Class = 'Classic' and Name like 'AEPI%'\">Browse models<\/button><br \/>\n<\/form>\n<\/p>\n<\/td>\n<\/tr>\n<\/table>\n<p>\n<strong>Please cite<\/strong><br \/>\n<FONT size=\"1pt\"><a href=\"http:\/\/gbe.oxfordjournals.org\/content\/5\/1\/163.long\" target=\"_blank\">Manoharan M, Ng Fuk Chong M, Va\u00eftinadapoul\u00e9 A, Frumence E, Sowdhamini R, Offmann B. Comparative genomics of odorant binding proteins in Anopheles gambiae, Aedes aegypti, and Culex quinquefasciatus. <em>Genome Biol Evol.<\/em> 2013;<strong>5<\/strong>(1):163-80.<\/a><br \/>\n<\/FONT>\n<\/p>\n<p><strong>Bibliographic references : <\/strong><\/p>\n<ol>\n<span style=\"font-size: x-small;\"> <\/p>\n<li>Genome Analysis Of Vectorial Capacity In Major Anopheles Vectors Of Malaria Parasites<br \/>\nAuthors: Nora J. Besansky, Anopheles Genomes Cluster Committee<\/li>\n<p><\/span>\n <\/ol>\n<p><!--\n\n\n<form action=\"\/cgi-bin\/mobpdb\/motclef3.cgi\" method=\"post\">  \n<textarea id =\"smallrecherche\" rows=\"1\" cols=\"10\" name=\"smalldialogue\" style=\"font-family : courier\" >AEPIOBP<\/textarea> <input type=\"submit\" value=\"Submit request\" \/>\n<\/form>\n\n\n--><\/p>\n","protected":false},"excerpt":{"rendered":"<p>The Anopheles sundaicus complex includes Anopheles epiroticus (formerly A. sundaicus A), which is a malaria vector located in Cambodia, peninsular Malaysia, Sarawak, Thailand and Vietnam. Its genome was sequenced in 2012. (source &#038; for more information : vectorbase.org) Statistics of OBPs from Anopheles epiroticus: Classic PlusC Two-domains* ND Total Number of OBPs 24 14 9 [&hellip;]<\/p>\n","protected":false},"author":3,"featured_media":0,"parent":9,"menu_order":10,"comment_status":"closed","ping_status":"closed","template":"page-without-sidebar.php","meta":{"footnotes":""},"class_list":["post-614","page","type-page","status-publish","hentry"],"jetpack_sharing_enabled":true,"_links":{"self":[{"href":"https:\/\/protsci-us2b.univ-nantes.fr\/mobpdb\/index.php?rest_route=\/wp\/v2\/pages\/614","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/protsci-us2b.univ-nantes.fr\/mobpdb\/index.php?rest_route=\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/protsci-us2b.univ-nantes.fr\/mobpdb\/index.php?rest_route=\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/protsci-us2b.univ-nantes.fr\/mobpdb\/index.php?rest_route=\/wp\/v2\/users\/3"}],"replies":[{"embeddable":true,"href":"https:\/\/protsci-us2b.univ-nantes.fr\/mobpdb\/index.php?rest_route=%2Fwp%2Fv2%2Fcomments&post=614"}],"version-history":[{"count":10,"href":"https:\/\/protsci-us2b.univ-nantes.fr\/mobpdb\/index.php?rest_route=\/wp\/v2\/pages\/614\/revisions"}],"predecessor-version":[{"id":777,"href":"https:\/\/protsci-us2b.univ-nantes.fr\/mobpdb\/index.php?rest_route=\/wp\/v2\/pages\/614\/revisions\/777"}],"up":[{"embeddable":true,"href":"https:\/\/protsci-us2b.univ-nantes.fr\/mobpdb\/index.php?rest_route=\/wp\/v2\/pages\/9"}],"wp:attachment":[{"href":"https:\/\/protsci-us2b.univ-nantes.fr\/mobpdb\/index.php?rest_route=%2Fwp%2Fv2%2Fmedia&parent=614"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}