{"id":664,"date":"2018-05-03T14:14:49","date_gmt":"2018-05-03T14:14:49","guid":{"rendered":"https:\/\/protsci-us2b.univ-nantes.fr\/mobpdb\/?page_id=664"},"modified":"2023-03-31T08:40:02","modified_gmt":"2023-03-31T08:40:02","slug":"anopheles-stephensi","status":"publish","type":"page","link":"https:\/\/protsci-us2b.univ-nantes.fr\/mobpdb\/?page_id=664","title":{"rendered":"Anopheles stephensi"},"content":{"rendered":"<p><!-- Image not found \"changed by Damien on March 31, 2023\"\n\n[caption width=\"235\" align=\"alignright\"]<img loading=\"lazy\" decoding=\"async\" src=\"https:\/\/www.vectorbase.org\/sites\/default\/files\/ftp\/image_gallery\/Anopheles%20Species\/An.%20stephensi\/5814.jpg\" class=\"size-medium\" width=\"235\" height=\"156\"> ( source : vectorbase.org)[\/caption]\n\n--><\/p>\n<p><em>Anopheles stephensi<\/em> Liston is a major malaria vector with a geographical range from the Middle East through the Indian subcontinent and China. Throughout its natural range, <em>Anopheles stephensi<\/em> is an important vector for both <em>Plasmodium falciparum<\/em> and <em>Plasmodium vivax<\/em>. The strain used for this genome sequencing project is the Indian Wild Type strain originally established at the Walter Reed Army Institute of Research. It belongs to the &#8220;type&#8221; biological form and has a segregating 2Rb inversion. <em>An. stephensi<\/em> is recognised as an important vector of malaria in urban areas bordering the Persian Gulf, including western and northwestern India. There are three known forms of <em>An. stephensi<\/em> including the typical form which is an efficient vector of urban malaria, the intermediate form, which is typically found in rural villages and peri-urban areas, but very little is known about its vector status, and the mysorensis form which is restricted to rural areas with poor vectorial capacity due to its highly zoophilic behaviour. The mysorensis form is, however, considered an important vector in Iran. Its genome was sequenced in 2014 [1]<\/p>\n<p>(source &amp; for more information : <a href=\"https:\/\/www.vectorbase.org\/organisms\/anopheles-stephensi\" rel=\"noopener\" target=\"_blank\">Vectorbase<\/a>)<\/p>\n<p><strong>Statistics of OBPs from <em>Anopheles stephensi<\/em>:<\/strong><\/p>\n<table style=\"height: 34px;\" width=\"600\" cellspacing=\"\u00bb0\u2033\" cellpadding=\"\u00bb0\u2033\" border=\"\u00bb1\u2033\">\n<tbody>\n<tr style=\"text-align: center;\">\n<td><\/td>\n<td>\n<form action=\"\/cgi-bin\/mobpdb\/resultat_sql.cgi\" method=\"post\">\n<button name=\"sql_query\" type=\"submit\" value=\"select * from proteins_v3 where Class like 'Classic%' and ID like 'ASTE%'\">Classic<\/button><br \/>\n<\/form>\n<\/td>\n<td>\n<form action=\"\/cgi-bin\/mobpdb\/resultat_sql.cgi\" method=\"post\">\n<button name=\"sql_query\" type=\"submit\" value=\"select * from proteins_v3 where Class like 'PlusC%' and ID like 'ASTE%'\">PlusC<\/button><br \/>\n<\/form>\n<\/td>\n<td>\n<form action=\"\/cgi-bin\/mobpdb\/resultat_sql.cgi\" method=\"post\">\n<button name=\"sql_query\" type=\"submit\" value=\"select * from proteins_v3 where Class like 'Two%' and ID like 'ASTE%'\">Two-domains*<\/button><br \/>\n<\/form>\n<\/td>\n<td>\n<form action=\"\/cgi-bin\/mobpdb\/resultat_sql.cgi\" method=\"post\">\n<button name=\"sql_query\" type=\"submit\" value=\"select * from proteins_v3 where Class like 'NA%' and ID like 'ASTE%'\">ND<\/button><br \/>\n<\/form>\n<\/td>\n<td>Total<\/td>\n<\/tr>\n<tr style=\"text-align: center;\">\n<td>Number of OBPs<\/td>\n<td style=\"text-align: center;\">27<\/td>\n<td style=\"text-align: center;\">15<\/td>\n<td style=\"text-align: center;\">10<\/td>\n<td style=\"text-align: center;\">1<\/td>\n<td style=\"text-align: center;\">53<\/td>\n<\/tr>\n<tr>\n<td><a href=\"https:\/\/protsci-us2b.univ-nantes.fr\/mobpdb\/?page_id=409\" target=\"_blank\" rel=\"noopener\">N\u00b0 with atomic structures (in PDB)<\/a><\/td>\n<td style=\"text-align: center;\">NA<\/td>\n<td style=\"text-align: center;\">NA<\/td>\n<td style=\"text-align: center;\">&#8211;<\/td>\n<td style=\"text-align: center;\">&#8211;<\/td>\n<td style=\"text-align: center;\">NA<\/td>\n<\/tr>\n<tr>\n<td>3D models<\/td>\n<td style=\"text-align: center;\">NA<\/td>\n<td style=\"text-align: center;\">NA<\/td>\n<td style=\"text-align: center;\">NA<\/td>\n<td style=\"text-align: center;\">&#8211;<\/td>\n<td style=\"text-align: center;\">NA<\/td>\n<\/tr>\n<tr>\n<td>Docking results**<\/td>\n<td style=\"text-align: center;\">NA<\/td>\n<td style=\"text-align: center;\">NA<\/td>\n<td style=\"text-align: center;\">NA<\/td>\n<td style=\"text-align: center;\">&#8211;<\/td>\n<td style=\"text-align: center;\">NA<\/td>\n<\/tr>\n<\/tbody>\n<\/table>\n<p><font size=\"1\">*(also known as <em>duplex<\/em> or <em>atypical<\/em>)<br \/>\n**(molecular docking was performed on 126 odorants that are known repellants and attractants for mosquitoes)<br \/>\nND : undetermined<br \/>\nNA : Not Available<\/font><\/p>\n<table width=\"100%\">\n<tbody>\n<tr>\n<td>\n<strong>Search the <span style=\"color: #3366ff;\">genomic<\/span> database for all OBP genes from <em>Anopheles stephensi<\/em><\/strong><\/p>\n<form action=\"\/cgi-bin\/mobpdb\/motclef.cgi\" method=\"post\">\n<button name=\"smalldialogue\" type=\"submit\" value=\"ASTE\">Browse genomic data<\/button><br \/>\n<\/form>\n<\/td>\n<\/tr>\n<tr>\n<td>\n<strong>Modelled structures of <em>Classic<\/em> OBP from <em>Anopheles stephensi<\/em><\/strong><\/p>\n<form action=\"\/cgi-bin\/mobpdb\/resultat_sql.cgi\" method=\"post\">\n<button name=\"sql_query\" type=\"submit\" value=\"select ID, Name, Uniprot, Class, Cluster from proteins_v3 where Class = 'Classic' and Name like 'ASTE%'\">Browse models<\/button><br \/>\n<\/form>\n<\/td>\n<\/tr>\n<\/tbody>\n<\/table>\n<p><strong>Please cite<\/strong><br \/>\n<font size=\"1pt\"><a href=\"http:\/\/gbe.oxfordjournals.org\/content\/5\/1\/163.long\" target=\"_blank\" rel=\"noopener\">Manoharan M, Ng Fuk Chong M, Va\u00eftinadapoul\u00e9 A, Frumence E, Sowdhamini R, Offmann B. Comparative genomics of odorant binding proteins in Anopheles gambiae, Aedes aegypti, and Culex quinquefasciatus. <em>Genome Biol Evol.<\/em> 2013;<strong>5<\/strong>(1):163-80.<\/a><br \/>\n<\/font><\/p>\n<p><strong>Bibliographic references : <\/strong><\/p>\n<ol>\n<span style=\"font-size: x-small;\"><\/p>\n<li>Jiang X, Peery A, Hall AB, et al. Genome analysis of a major urban malaria vector mosquito, Anopheles stephensi. Genome Biology. 2014;15(9):459. doi:10.1186\/s13059-014-0459-2.<\/li>\n<li>Genome Analysis Of Vectorial Capacity In Major Anopheles Vectors Of Malaria Parasites<br \/>\nAuthors: Nora J. Besansky, Anopheles Genomes Cluster Committee<\/li>\n<li>Sinka, M.E., Bangs, M.J, Manguin, S., Chareonviriyaphap, T., Patil, A.P., Temperley, W.H., Gething, P.W., Elyazar, I.R.F., Kabaria, C.W., Harbach, R.E. and Hay, S.I. (2011). The dominant Anopheles vectors of human malaria in the Asia-Pacific region: occurrence data, distribution maps and bionomic pr\u00e9cis. Parasites and Vectors 4: 89<\/li>\n<p><\/span><\/ol>\n<p><!--\n\n\n\n<form action=\"\/cgi-bin\/mobpdb\/motclef3.cgi\" method=\"post\">  \n<textarea id =\"smallrecherche\" rows=\"1\" cols=\"10\" name=\"smalldialogue\" style=\"font-family : courier\" >ASTEOBP<\/textarea> <input type=\"submit\" value=\"Submit request\" \/>\n<\/form>\n\n\n\n--><\/p>\n","protected":false},"excerpt":{"rendered":"<p>Anopheles stephensi Liston is a major malaria vector with a geographical range from the Middle East through the Indian subcontinent and China. Throughout its natural range, Anopheles stephensi is an important vector for both Plasmodium falciparum and Plasmodium vivax. The strain used for this genome sequencing project is the Indian Wild Type strain originally established [&hellip;]<\/p>\n","protected":false},"author":3,"featured_media":0,"parent":9,"menu_order":17,"comment_status":"closed","ping_status":"closed","template":"page-without-sidebar.php","meta":{"footnotes":""},"class_list":["post-664","page","type-page","status-publish","hentry"],"jetpack_sharing_enabled":true,"_links":{"self":[{"href":"https:\/\/protsci-us2b.univ-nantes.fr\/mobpdb\/index.php?rest_route=\/wp\/v2\/pages\/664","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/protsci-us2b.univ-nantes.fr\/mobpdb\/index.php?rest_route=\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/protsci-us2b.univ-nantes.fr\/mobpdb\/index.php?rest_route=\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/protsci-us2b.univ-nantes.fr\/mobpdb\/index.php?rest_route=\/wp\/v2\/users\/3"}],"replies":[{"embeddable":true,"href":"https:\/\/protsci-us2b.univ-nantes.fr\/mobpdb\/index.php?rest_route=%2Fwp%2Fv2%2Fcomments&post=664"}],"version-history":[{"count":7,"href":"https:\/\/protsci-us2b.univ-nantes.fr\/mobpdb\/index.php?rest_route=\/wp\/v2\/pages\/664\/revisions"}],"predecessor-version":[{"id":864,"href":"https:\/\/protsci-us2b.univ-nantes.fr\/mobpdb\/index.php?rest_route=\/wp\/v2\/pages\/664\/revisions\/864"}],"up":[{"embeddable":true,"href":"https:\/\/protsci-us2b.univ-nantes.fr\/mobpdb\/index.php?rest_route=\/wp\/v2\/pages\/9"}],"wp:attachment":[{"href":"https:\/\/protsci-us2b.univ-nantes.fr\/mobpdb\/index.php?rest_route=%2Fwp%2Fv2%2Fmedia&parent=664"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}