FoRSA

FoRSA is a server for protein fold recognition from amino acid sequence.

Enter an amino acid sequence in fasta format :

Exemple of input sequence

>d1a4sa_
aqlvdsmpsastgsvvvtddlnywggrrikskdgattepvfepatgrvlcqmvpcgaeevdqavqsaqaaylkwskmagiersrvmleaariirerrdniaklevinngktiteaeydidaawqcieyyaglaptlsgqhiqlpggafaytrreplgvcagilawnypfmiaawkcapalacgnavvfkpspmtpvgvilaeifheagvpvglvnvvqggaetgsllchhpnvakvsftgsvptgkkvmemsaktvkhvtlelggkspllifkdcelenavrgalmanfltqgqvctngtrvfvqreimpqfleevvkrtkaivvgdplltetrmggliskpqldkvlgfvaqakkegarvlcggepltpsdpklkngyfmspcvldncrddtcvkeeifgpvmsvlpfdteeevlqrannttfglasgvftrdisrahrvaanleagtcyintysispvevpfggykmsgfgrengqatvdyysqlktvivemgdvdslf

Or

Upload an amino acid sequence file in fasta format :

Length Threshold(in %)
 Gap penalty
Alignment
 Fold library

Ranks

Email address

To obtain the results of completed jobs, enter the assigned JOBID :

Your results are saved on the server for 21days.

       

To cite this paper :
Use of a structural alphabet to find compatible folds for amino acid sequences.
Mahajan S, de Brevern AG, Sanejouand YH, Srinivasan N, Offmann B.
       Protein Sci. 2015 Jan;24(1):145-53. doi: 10.1002/pro.2581. Epub 2014 Oct 25.
PMID: 25297700
http://onlinelibrary.wiley.com/doi/10.1002/pro.2581/abstract